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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015797006.1_cds_XP_016452683.1_4638
CDS Infomation

[gene=LOC107777207] [db_xref=GeneID:107777207] [protein=lignin-forming anionic peroxidase-like] [protein_id=XP_016452683.1] [location=complement(join(22669..23057,23160..23325,23514..23705,23805..24032))] [gbkey=CDS]
Sequence

ATGATTAGTATTTCAAGCAACTCTTTTGCAGCCATTGCTGCTATGTTTTCTCTTCTCTTT
ATATTCTCCAGCATGCAATGCCATGCACAACTTTCTTCCACATTCTATGATCGCACTTGC
CCTAATGCTCTCAACACCATTCGTACAAGTGTTAGACAAGCAGTGTCACGTGAACGTCGA
ATGGCTGCATCTCTTATTCGCCTTCATTTTCATGATTGCTTTGTTCAGGGTTGTGATGCT
TCTATCTTACTTGACGAAACCCCTACAATTGTTAGTGAGAAGACTGCGTTGCCGAATCTT
GGGTCAGCTAGAGGCTATGGTATTATAGAAGATGCCAAAAGAGAGCTTGAAAAAACATGT
CCAGGAATTGTATCATGTGCAGACATACTTGCTGTTGCCGCTAGAGATGCATCAACTCTC
GTTGGAGGTCCAACATGGGCAGTGAAACTCGGAAGAAGAGATTCAACAACTGCAAGTCAT
ACACTTGCTGAAACTGATCTCCCAGGTCCATTTGATCCTCTTAATAGGCTTATTTCTAGC
TTTGCAAGCAAAGGCCTTAGCACAAGGGATATGGTTGCTTTATCAGGAGCACATTCAATT
GGCCAAGCACAATGTTTCCTTTTTCGCGATAGGATTTATGGAAATGGAACAGATATTGAT
GCTGGATTTGCTAGCACAAGAAGACGTCAATGTCCTAAAGAAGACCAAAATGGAAACCTA
GCTCCACTTGATTTGGTTACACCTAATCAATTGGATAACAATTATTTCAAGAACTTGAGG
CAAAGAAAAGGTCTTCTTCAATCAGATCAAGTCCTTCTTAGTGGTGGATCTACTGATGAT
ATTGTTTCTGAATATAGTAACAGTCCTCGCGCATTTGCCTCTGATTTTGCTGCTGCTATG
ATTAGAATGGGAGATATTAGTCCCCTAACTGGTCAAAATGGGATCATAAGAACTGTCTGC
GGCTCCCTAAATTGA

Peptide Sequence

PEP ID

XP_016452683.1
PEP Infomation

PREDICTED: lignin-forming anionic peroxidase-like [Nicotiana tabacum]
Sequence

MISISSNSFAAIAAMFSLLFIFSSMQCHAQLSSTFYDRTCPNALNTIRTSVRQAVSRERR
MAASLIRLHFHDCFVQGCDASILLDETPTIVSEKTALPNLGSARGYGIIEDAKRELEKTC
PGIVSCADILAVAARDASTLVGGPTWAVKLGRRDSTTASHTLAETDLPGPFDPLNRLISS
FASKGLSTRDMVALSGAHSIGQAQCFLFRDRIYGNGTDIDAGFASTRRRQCPKEDQNGNL
APLDLVTPNQLDNNYFKNLRQRKGLLQSDQVLLSGGSTDDIVSEYSNSPRAFASDFAAAM
IRMGDISPLTGQNGIIRTVCGSLN

Transcript Sequence

Gene sequence data has not been registered.